Bioinformatics Course Notes

Will you give me Notes of Bioinformatics Course offered at the Rensselaer Polytechnic Institute ?

[Raman Vij]

Here you want the Notes of Bioinformatics Course but it not possible for me to give all lecture notes here. So I am here providing you topics of lectures of the Bioinformatics Course offered at Rensselaer Polytechnic Institute.

Bioinformatics Course includes lecture topics:

Thinking algorithmically.
Sequence databases. Sequencing. Dotplots. Motifs. Scoring.
Pairwise sequence alignment with gaps. Dynamic programming.
Local versus global alignment. Multiple sequence alignment
Alignment scoring. Jukes-Cantor. BLOSUM, PAM.
Database searching. Indexing. FASTA and BLAST.
Statistical Significance. E-values.
Multiple sequence alignment. Clustal, Muscle.
Editing multiple sequence alignments. bAliBase.
Sequence weights, profiles and logos.
Guest lecture: Genes and natural products (Dana Crawford, Albany Med)
Phylogenetic analysis. Orthologs and paralogs.
Parsimony. Maximum likelihood. Bootstrapping.
The Tree of life. Monophyly and Paraphyly.
Markov chains. Hidden Markov model.
RNA secondary structure prediction.
Microrepeats, Transposons. continued
Gene finding. Splicing.
Gene ontology. Sequence annotation.
Journal club. Covariance in protein sequences.
Metagenomics.

Please tell me which topics notes required.

I am here attaching the notes of Sequence databases. Sequencing. Dotplots. Motifs. Scoring topic of the bioinformatics .

Notes --- Sequence databases. Sequencing. Dotplots. Motifs. Scoring ----bioinformatics







Contact detail:
Rensselaer Polytechnic Institute
110 8th St, Troy, NY, United States ‎
+1 518-276-6000 ‎

Map:
[MAP]https://maps.google.co.in/maps?q=Rensselaer+Polytechnic+Institute&hl=en&ll=4 2.730748,-73.678286&spn=0.007061,0.015664&sll=13.138294,79.9 11555&sspn=0.037446,0.062656&t=m&z=16&iwloc=A[/MAP]